Package: ngme2 0.9.8

ngme2: Linear Latent Non-Gaussian Models with Flexible Distributions
Fits and analyzes linear latent non-Gaussian models for temporal, spatial, and space-time data. The package provides model components for autoregressive and Ornstein-Uhlenbeck processes, random walks, Matern fields based on stochastic partial differential equations, separable and non-separable space-time models, graph-based Matern models, bivariate type-G fields, and user-defined sparse operators. Latent fields and observation models can use Gaussian and non-Gaussian noise distributions, including normal inverse Gaussian, generalized asymmetric Laplace, and skew-t distributions. Functions are included for simulation, likelihood-based estimation, prediction, cross-validation, convergence diagnostics, stochastic gradient optimization, batch-means confidence intervals, and posterior-like sampling. The modeling framework is described in Bolin, Jin, Simas and Wallin (2026) "A Unified and Computationally Efficient Non-Gaussian Statistical Modeling Framework" <doi:10.48550/arXiv.2602.23987>.
Authors:
ngme2_0.9.8.tar.gz
ngme2_0.9.8.zip(r-4.7)ngme2_0.9.8.zip(r-4.6)ngme2_0.9.8.zip(r-4.5)
ngme2_0.9.8.tgz(r-4.6-x86_64)ngme2_0.9.8.tgz(r-4.6-arm64)ngme2_0.9.8.tgz(r-4.5-x86_64)ngme2_0.9.8.tgz(r-4.5-arm64)
ngme2_0.9.8.tar.gz(r-4.7-arm64)ngme2_0.9.8.tar.gz(r-4.7-x86_64)ngme2_0.9.8.tar.gz(r-4.6-arm64)ngme2_0.9.8.tar.gz(r-4.6-x86_64)
manual.pdf |manual.html✨
card.svg |card.png
ngme2/json (API)
NEWS
| # Install 'ngme2' in R: |
| install.packages('ngme2', repos = c('https://davidbolin.r-universe.dev', 'https://cloud.r-project.org')) |
Bug tracker:https://github.com/davidbolin/ngme2/issues
Pkgdown/docs site:https://davidbolin.github.io
- argo_float - Argo float dataset
- cienaga - The swamp of Cienaga Grande in Santa Marta, Colombia
- cienaga.border - The x y location of the border of the swamp of Cienaga Grande in Santa Marta, Colombia
Last updated from:004649a204. Checks:8 WARNING, 4 ERROR, 1 FAIL. Indexed: yes.
| Target | Result | Time | Files | Syslog |
|---|---|---|---|---|
| linux-devel-arm64 | WARNING | 804 | ||
| linux-devel-x86_64 | WARNING | 550 | ||
| source / vignettes | ERROR | 1815 | ||
| linux-release-arm64 | WARNING | 675 | ||
| linux-release-x86_64 | WARNING | 532 | ||
| macos-release-arm64 | WARNING | 359 | ||
| macos-release-x86_64 | WARNING | 965 | ||
| macos-oldrel-arm64 | WARNING | 384 | ||
| macos-oldrel-x86_64 | WARNING | 860 | ||
| windows-devel | ERROR | 671 | ||
| windows-release | ERROR | 678 | ||
| windows-oldrel | ERROR | 673 | ||
| wasm-release | FAIL | 351 |
Exports:adagradadamadamWadaptive_gdarar1armaarma11batch_decaybatch_means_cibatch_means_estimatorbfgsbvbv_materncalibrate_inv_exp_lambdacalibrate_inv_exp_lambda_driven_nigcompare_noise_kldcompute_index_corr_from_mapcompute_log_likecompute_ngme_cicompute_ngme_CIcompute_ngme_sgld_samplescontrol_ngmecontrol_optcontrol_opt_batch_cicreate_paired_cv_splitscross_validationdgaldgigdigdigamdnigfgenericgeneric_nsget_data_from_formulaget_parameter_distanceget_trace_trajectoriesget_trajectoriesiidmake_time_series_cv_indexmaternmean_listmerge_noisemomentumname2funngmengme_as_sparsengme_batch_cingme_cov_matrixngme_make_mesh_replsngme_model_typesngme_noise_typesngme_optimizersngme_post_samplesngme_prior_typesngme_resultngme_sgld_cingme_sgld_samplesngme_ts_make_Angme_updatenoise_galnoise_gal_momentsnoise_momentsnoise_nignoise_nig_momentsnoise_normalnoise_normal_nignoise_skew_tnoise_topenmp_testoupgalpgigpigpigampnigpoly_decayposterior_plotprecision_matrix_multivariateprecision_matrix_multivariate_spdeprecond_sgdprior_half_cauchyprior_inv_expprior_inv_exponentialprior_noneprior_normalprior_pc_sdpriorsqgalqgigqigqigamqnigrergalrgigrigrigamrmsproprnigrw1rw2sgdsgldspacetimestepsize_controlstepsize_decaystepsize_scheduletptraceplotvar1
Dependencies:classclassIntclicpp11DBIdplyre1071farverfmeshergenericsggplot2gluegridExtragtableisobandKernSmoothlabelinglatticelifecyclemagrittrMASSMatrixpillarpkgconfigproxyR6RColorBrewerRcppRcppEigenrlangs2S7scalessfspsplancstibbletidyselectunitsutf8vctrsviridisLitewithrwk
